Highlight research papers, and keep the note on the page
PaperLab is a free, open-source PDF reader for research papers with a highlighter built for note-taking. Select text to highlight it in one of five colours or a custom one, and add a note if you want. Hover a highlight to see, edit, recolour or delete its note in place, or right-click it to copy the quote. The page stays white in every theme, so colours read the same.

What you can do
- Highlight in yellow, green, blue, pink or orange, or pick any custom colour.
- Add a note while highlighting, or later from the highlight’s card.
- Hover a highlight to read, edit, recolour or delete its note without leaving the page.
- Right-click a highlight for the same actions and Copy quote.
- Read with zoom in a light, dark or system theme; the PDF page stays white.
- Resize the side panel by dragging its edge; it remembers the width.
How it works
Select
Drag across the words you want, as in any PDF reader.
Pick a colour
Choose one of five presets or a custom colour. Violet is left out: it means AI.
Write, if you want
Add a note now or later. It stays attached to exactly that passage.
Tips
- Give each colour one meaning and keep it: for example yellow for claims, green for methods, blue for numbers.
- Highlight less than you think. A highlight with a one-line note is worth ten without.
- Use Copy quote when writing, so the quotation matches the paper exactly.
Questions people ask
Can I use my own highlight colours?
Yes. Pick one of five presets or any custom colour. Violet is not a preset because PaperLab uses it only for AI.
Does dark mode change the PDF colours?
No. The app follows your light, dark or system theme, but the PDF page itself stays white, so highlights look the same.
Where are my highlights stored?
In a local database on your computer, with the exact position of each passage on its page. Nothing is uploaded.
Works well with
Guides
- How to read a research paper efficiently — The three-pass method, what to skip, and how to keep what you read.
- How to take notes on research papers — Notes you can find again and trace back to the passage they came from.